Programme

Hotel International - Lobby

Rooms BCD

Rooms BCD

Atrium

Rooms BCD

BioDigs: a GDSCN Project; Tyler Collins, Alex Ostrovsky

Galaxy activities in Czech Republic; Miroslav Ruda, Aleš Křenek

Galaxy-ML2: Simple, Powerful, and Robust Machine Learning Tools for Galaxy; Junhao Qui, et al.

Community Lightning Talks: SPOC, GGA, SSA, Imaging, & GCB; Wendi Bacon, et al.

Empowering Users to Bring Their Own Storage; John Chilton

A Galaxy Workflow Developer's Companion in your Browser; David López

Driving Decisions with Data: Introducing the Key Usage Indicators (KUI) for Galaxy Project Governance; Enis Afgan, Nuwan Goonasekera

The AquaINFRA platform: A research data infrastructure for marine and inland waters; Markus Konkol, et al.

Developing Interactive Neutron Science Applications using Galaxy; Sergey Yakubov, et al.

ABRomics: a Galaxy-based One Health Antimicrobial Resistance Platform; Pierre Marin, et al.

Restaurant Lucullus

Rooms B, C, D, M1, M2

Rooms BCD

Rooms B, C, D, M1, M2

Rooms B, C, D, M1, M2

Rooms BCD

Atrium

Rooms BC, D

Analysis track

Genomics and transcriptomics of Fusarium musae from human and banana; Luca Degradi, et al.

MAdLand computational resources through Galaxy; Deepti Varshney, et al.

Genomic and evolutionary analysis of the cytochrome P450 gene family in a ground -herb of Amazonian riparian forests with a waterflooding gradient; Luca Degradi, et al.

The Galaxy Platform: Applications to Catalysis Workflows; Patrick Austin, et al.

A Toolset for Building and Simulating Transmembrane Proteins in Galaxy; Bryan Raubenolt, Jayadev Joshi, Daniel Blankenberg

Ab-initio Semi-Empirical Mass Spectra Predictions with Galaxy; Wudmir Rojas, et al.

Bridging the Gap: A Systematic Workflow to Convert Low-Resolution GC-MS Libraries to High-Resolution in Silico for Enhanced Chemical Profiling; Zargham Ahmad, et al.

Automated Reference Genome Assembly in Galaxy - An Update; Delphine Larivière, et al.

Long-read genomes from diverse outbred dogs; Tyler Collins, Alex Ostrovsky

Using Galaxy and Integrated Genome Browser to study tardigrade biology; Paige Kulzer, Nowlan Freese, Ann Loraine

Enablement track: workflows & administration

Visualizing Workflow Runs in Galaxy: The Graph View for Workflow Invocations; Ahmed Awan

Upgrading User Experience: Introducing the New Galaxy UI; Aysam Guerler, et al.

Enhanced Workflow Management in Galaxy; Alireza Heidari, Laila Los, Aysam Guerler

Maintaining and improving a large collection of workflows; Marius van den Beek

PathoGFAIR: FAIR Workflows for Pathogen Detection & Samples Comparison; Engy Nasr, et al.

Data access architecture at "Galactic" scale: what's new and what's next; John Davis

Galaxy CoDex for finding tools, workflows, and training; Bérénice Batut

DevOps techniques for developing and integrating tools in Galaxy; Serena Lorenzini, Giuseppe Profiti

Metascheduling with TPV: Weighting jobs on multiple constraints for distributed deployment over local and remote resources; Catherine Bromhead, Justin Lee, Nuwan Goonasekera

Integrating OGC API services into Galaxy; Markus Konkol, Alexander Pilz

Restaurant Lucullus

Rooms B, C, D, M1, M2

Rooms BCD

Rooms B, C, D, M1, M2

Rooms B, C, D, M1, M2

Mendel Square - Augustinian Abbey, Mendel Museum

Mendel Square - Augustinian Abbey

Rooms BCD

Rooms BCD

Atrium

Rooms BCD

Rooms BCD

Atrium

Hotel International

Villa Tugendhat - Černopolní 45

Villa Tugendhat - Černopolní 45

Villa Tugendhat - Černopolní 45

Villa Tugendhat - Černopolní 45

Moravian square - Jobst statue

Rooms BCD

Rooms BCD

Atrium

Rooms BC, D

Analysis track

Navigating the variant landscape: integrating MAVE data analysis into Galaxy; Polina Polunina

A Galaxy-based immunopeptidogenomic pipeline for neoantigen discovery; Subina Mehta, et al.

Clinical metaproteomics workflow to study host-microbiome dynamics; Katherine Do, et al.

MitoLink2.0: A generic integrated web-based workflow system to evaluate genotype-phenotype correlations in human mitochondrial diseases; Shweta Pandey, et al.

Persist-seq: a set of reproducible single cell RNA-seq analysis pipelines for understanding early persister cells in cancer; Pablo Moreno, et al.

Viral pathogen data analysis with Galaxy; Wolfgang Maier, et al.

FAIR viral quasispecies reconstruction from short reads - possibilities and limitations; Stephen Shank, et al.

BREW3R - a workflow to get more reads in genes in 3'-end sequencing methods; Lucille Lopez-Delisle, Denis Duboule

Reconstructing cell type specification trajectories in the last common animal ancestor; Natalia E Padillo-Anthemides

Structural annotation of repeated regions in the Psidium guajava L. genome and development of molecular markers for regulatory regions; Giovanna Pinto Pires, et al.

Enablement track: outreach & automation

Updates from the Global Galaxy Training Network (GTN); Saskia Hiltemann, Helena Rasche, Bérénice Batut

Communication Strategies and Community Engagement in the Galaxy Project: Exploring Current Practices and Future Opportunities; Natalie Whitaker-Allen

Addressing user needs in single-cell analysis; internship and obstacles; Morgan Howells, et al.

Galaxy as a Gateway to Bioinformatics: an updated scRNA-seq analysis training suite; Julia Jakiela, et al.

Image Analysis in Galaxy: Recent Developments and Highlights; Leonid Kostrykin, Karl Rohr

Interactivity as a tool power-up – Interactive Client Tools reimplemented in the frontend; Sveinung Gundersen, Morten Johansen

TES job submission and streamlined data transfers; Aleš Křenek, et al.

Community-driven standards development for reference genome generation; Tom Brown, et al.

UseGalaxy France: an example of a national UseGalaxy server; Anthony Bretaudeau, et al.

"Smarter" job scheduling using user provided infrastructure; Paul De Geest, Frederik Coppens, Sebastian Luna-Valero

Restaurant Lucullus

Rooms B, C, D, M1, M2

Atrium

Rooms B, C, D, M1, M2

Rooms BCD

Pairing Data Analysis Methods with Sequencing Products to Meet Scientist’s Needs. What Do People Want?; Adrian Reich, Ariel Erijman, Bradley Langhorst

Astronomy in Galaxy; Denys Savchenko, et al.

Estimating Cloud Computing Costs when Running Bioinformatics Workloads; Enis Afgan, et al.

Community-Building Initiatives in Bioconductor; Maria Doyle

Rooms B, C, D, M1, M2

KUMST - Údolní 19

KUMST - Údolní 19